Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 KRT8P3-201ENST00000519669 1449 ntBASIC10.1□□□□□ -0.79
SEC61BP60468 KRT8P7-201ENST00000533003 1432 ntBASIC10.1□□□□□ -0.79
SEC61BP60468 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC10.1□□□□□ -0.79
SEC61BP60468 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SEC61BP60468 HBZP1-201ENST00000354915 429 ntBASIC10.1□□□□□ -0.79
SEC61BP60468 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.1□□□□□ -0.79
SEC61BP60468 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC10.1□□□□□ -0.79
SEC61BP60468 ATP5G2P1-201ENST00000433580 426 ntBASIC10.1□□□□□ -0.79
SEC61BP60468 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SEC61BP60468 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC10.1□□□□□ -0.79
SEC61BP60468 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC10.1□□□□□ -0.79
SEC61BP60468 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC10.1□□□□□ -0.79
SEC61BP60468 PRELID1P1-202ENST00000567272 903 ntBASIC10.1□□□□□ -0.79
SEC61BP60468 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC10.1□□□□□ -0.79
SEC61BP60468 MIR3652-201ENST00000579335 131 ntBASIC10.1□□□□□ -0.79
SEC61BP60468 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SEC61BP60468 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC10.1□□□□□ -0.79
SEC61BP60468 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
SEC61BP60468 AC112497.1-201ENST00000624824 639 ntBASIC10.1□□□□□ -0.79
SEC61BP60468 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SEC61BP60468 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC10.1□□□□□ -0.79
SEC61BP60468 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SEC61BP60468 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
SEC61BP60468 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
SEC61BP60468 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SEC61BP60468 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC10.09□□□□□ -0.79
SEC61BP60468 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 TBC1D3P2-202ENST00000577902 1649 ntBASIC10.09□□□□□ -0.79
SEC61BP60468 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SEC61BP60468 AL023284.2-201ENST00000405850 579 ntBASIC10.09□□□□□ -0.79
SEC61BP60468 SPDYE15P-201ENST00000424157 909 ntBASIC10.09□□□□□ -0.79
SEC61BP60468 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.09□□□□□ -0.79
SEC61BP60468 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC10.09□□□□□ -0.79
SEC61BP60468 MIR4674-201ENST00000582457 87 ntBASIC10.09□□□□□ -0.79
SEC61BP60468 CLEC4GP1-201ENST00000596555 870 ntBASIC10.09□□□□□ -0.79
SEC61BP60468 AC092329.2-201ENST00000598402 547 ntBASIC10.09□□□□□ -0.79
SEC61BP60468 AC024243.1-201ENST00000609234 778 ntBASIC10.09□□□□□ -0.79
SEC61BP60468 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
SEC61BP60468 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
SEC61BP60468 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SEC61BP60468 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SEC61BP60468 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms