Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CLDN2P57739 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN2P57739 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN2P57739 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.58■□□□□ 0.56
CLDN2P57739 AC034232.1-201ENST00000506026 1064 ntBASIC18.58■□□□□ 0.56
CLDN2P57739 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN2P57739 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN2P57739 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN2P57739 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN2P57739 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN2P57739 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN2P57739 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN2P57739 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLDN2P57739 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CLDN2P57739 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN2P57739 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN2P57739 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN2P57739 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLDN2P57739 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN2P57739 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.58■□□□□ 0.56
CLDN2P57739 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN2P57739 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLDN2P57739 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN2P57739 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CLDN2P57739 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN2P57739 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.57■□□□□ 0.56
CLDN2P57739 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN2P57739 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN2P57739 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.57■□□□□ 0.56
CLDN2P57739 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.57■□□□□ 0.56
CLDN2P57739 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN2P57739 SEC1P-202ENST00000473944 940 ntBASIC18.57■□□□□ 0.56
CLDN2P57739 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN2P57739 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.57■□□□□ 0.56
CLDN2P57739 AC112497.1-201ENST00000624824 639 ntBASIC18.57■□□□□ 0.56
CLDN2P57739 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN2P57739 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN2P57739 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN2P57739 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN2P57739 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN2P57739 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN2P57739 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN2P57739 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN2P57739 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN2P57739 AC069148.1-201ENST00000608741 768 ntBASIC18.56■□□□□ 0.56
CLDN2P57739 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN2P57739 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLDN2P57739 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 AC141586.3-201ENST00000562166 1838 ntBASIC18.56■□□□□ 0.56
CLDN2P57739 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN2P57739 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN2P57739 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN2P57739 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN2P57739 AL109659.2-201ENST00000606809 1674 ntBASIC18.55■□□□□ 0.56
CLDN2P57739 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN2P57739 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN2P57739 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN2P57739 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 AL157888.1-201ENST00000631930 593 ntBASIC18.55■□□□□ 0.56
CLDN2P57739 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN2P57739 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLDN2P57739 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CLDN2P57739 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms