Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CMC4P56277 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CMC4P56277 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CMC4P56277 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMC4P56277 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMC4P56277 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.03□□□□□ -0.16
CMC4P56277 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CMC4P56277 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.03□□□□□ -0.16
CMC4P56277 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CMC4P56277 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
CMC4P56277 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 AC211429.1-201ENST00000415277 523 ntBASIC14.03□□□□□ -0.16
CMC4P56277 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CMC4P56277 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.03□□□□□ -0.16
CMC4P56277 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.03□□□□□ -0.16
CMC4P56277 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CMC4P56277 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.03□□□□□ -0.16
CMC4P56277 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CMC4P56277 CYP2D8P-201ENST00000433633 1490 ntBASIC14.03□□□□□ -0.16
CMC4P56277 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CMC4P56277 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.03□□□□□ -0.16
CMC4P56277 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.03□□□□□ -0.16
CMC4P56277 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMC4P56277 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMC4P56277 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMC4P56277 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMC4P56277 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.02□□□□□ -0.16
CMC4P56277 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.02□□□□□ -0.16
CMC4P56277 AL512353.2-201ENST00000448759 1962 ntBASIC14.02□□□□□ -0.16
CMC4P56277 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CMC4P56277 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.02□□□□□ -0.16
CMC4P56277 AL109659.2-201ENST00000606809 1674 ntBASIC14.02□□□□□ -0.16
CMC4P56277 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMC4P56277 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMC4P56277 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMC4P56277 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.02□□□□□ -0.16
CMC4P56277 KRT8P7-201ENST00000533003 1432 ntBASIC14.02□□□□□ -0.16
CMC4P56277 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.02□□□□□ -0.17
CMC4P56277 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CMC4P56277 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.02□□□□□ -0.17
CMC4P56277 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.02□□□□□ -0.17
CMC4P56277 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.02□□□□□ -0.17
CMC4P56277 AP003041.3-201ENST00000527151 707 ntBASIC14.02□□□□□ -0.17
CMC4P56277 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.02□□□□□ -0.17
CMC4P56277 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.02□□□□□ -0.17
CMC4P56277 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.02□□□□□ -0.17
CMC4P56277 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CMC4P56277 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CMC4P56277 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CMC4P56277 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMC4P56277 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.01□□□□□ -0.17
CMC4P56277 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CMC4P56277 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMC4P56277 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMC4P56277 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CMC4P56277 KRT8P32-201ENST00000512863 1461 ntBASIC14.01□□□□□ -0.17
CMC4P56277 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMC4P56277 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.01□□□□□ -0.17
CMC4P56277 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CMC4P56277 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMC4P56277 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms