Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.41■□□□□ 0.7
NEK3P51956 C2orf69P3-201ENST00000565542 1120 ntBASIC19.41■□□□□ 0.7
NEK3P51956 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 AC010947.1-201ENST00000623454 693 ntBASIC19.41■□□□□ 0.7
NEK3P51956 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NEK3P51956 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 LINC01568-207ENST00000641790 1380 ntBASIC19.41■□□□□ 0.7
NEK3P51956 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK3P51956 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.41■□□□□ 0.7
NEK3P51956 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK3P51956 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK3P51956 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.41■□□□□ 0.7
NEK3P51956 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NEK3P51956 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.4■□□□□ 0.7
NEK3P51956 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NEK3P51956 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK3P51956 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.4■□□□□ 0.7
NEK3P51956 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.4■□□□□ 0.7
NEK3P51956 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 AC104581.1-202ENST00000635932 2618 ntBASIC19.4■□□□□ 0.7
NEK3P51956 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.4■□□□□ 0.7
NEK3P51956 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEK3P51956 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.4■□□□□ 0.7
NEK3P51956 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
NEK3P51956 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
NEK3P51956 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NEK3P51956 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NEK3P51956 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
NEK3P51956 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.39■□□□□ 0.69
NEK3P51956 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.39■□□□□ 0.69
NEK3P51956 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
NEK3P51956 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEK3P51956 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK3P51956 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK3P51956 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK3P51956 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NEK3P51956 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK3P51956 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK3P51956 KRT18P22-201ENST00000402024 1347 ntBASIC19.38■□□□□ 0.69
NEK3P51956 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK3P51956 KRT18P21-201ENST00000515767 1272 ntBASIC19.38■□□□□ 0.69
NEK3P51956 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK3P51956 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NEK3P51956 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NEK3P51956 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK3P51956 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.38■□□□□ 0.69
NEK3P51956 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.38■□□□□ 0.69
NEK3P51956 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.38■□□□□ 0.69
NEK3P51956 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
NEK3P51956 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK3P51956 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
NEK3P51956 AC096733.2-201ENST00000609937 1394 ntBASIC19.38■□□□□ 0.69
NEK3P51956 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK3P51956 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEK3P51956 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK3P51956 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK3P51956 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK3P51956 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK3P51956 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK3P51956 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEK3P51956 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK3P51956 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEK3P51956 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NEK3P51956 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK3P51956 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.37■□□□□ 0.69
NEK3P51956 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK3P51956 MFAP1P1-201ENST00000442257 1255 ntBASIC19.37■□□□□ 0.69
NEK3P51956 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.37■□□□□ 0.69
NEK3P51956 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK3P51956 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.37■□□□□ 0.69
NEK3P51956 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms