Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CENPAP49450 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CENPAP49450 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CENPAP49450 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CENPAP49450 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
CENPAP49450 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CENPAP49450 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.06■□□□□ 0.32
CENPAP49450 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.06■□□□□ 0.32
CENPAP49450 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.06■□□□□ 0.32
CENPAP49450 AP003097.1-201ENST00000530657 1135 ntBASIC17.06■□□□□ 0.32
CENPAP49450 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.06■□□□□ 0.32
CENPAP49450 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 FEM1AP3-201ENST00000403722 1741 ntBASIC17.06■□□□□ 0.32
CENPAP49450 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.06■□□□□ 0.32
CENPAP49450 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CENPAP49450 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.06■□□□□ 0.32
CENPAP49450 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.06■□□□□ 0.32
CENPAP49450 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CENPAP49450 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CENPAP49450 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CENPAP49450 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 Z98044.1-201ENST00000632503 1764 ntBASIC17.05■□□□□ 0.32
CENPAP49450 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CENPAP49450 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.05■□□□□ 0.32
CENPAP49450 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.05■□□□□ 0.32
CENPAP49450 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.05■□□□□ 0.32
CENPAP49450 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.05■□□□□ 0.32
CENPAP49450 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.05■□□□□ 0.32
CENPAP49450 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CENPAP49450 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.05■□□□□ 0.32
CENPAP49450 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CENPAP49450 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CENPAP49450 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.05■□□□□ 0.32
CENPAP49450 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.05■□□□□ 0.32
CENPAP49450 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CENPAP49450 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CENPAP49450 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CENPAP49450 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CENPAP49450 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 TSPY21P-201ENST00000433481 731 ntBASIC17.04■□□□□ 0.32
CENPAP49450 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.04■□□□□ 0.32
CENPAP49450 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CENPAP49450 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.04■□□□□ 0.32
CENPAP49450 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.04■□□□□ 0.32
CENPAP49450 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.04■□□□□ 0.32
CENPAP49450 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CENPAP49450 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CENPAP49450 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms