Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.94■□□□□ 0.78
LHX1P48742 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LHX1P48742 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LHX1P48742 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
LHX1P48742 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LHX1P48742 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.93■□□□□ 0.78
LHX1P48742 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.93■□□□□ 0.78
LHX1P48742 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.93■□□□□ 0.78
LHX1P48742 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.93■□□□□ 0.78
LHX1P48742 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LHX1P48742 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.93■□□□□ 0.78
LHX1P48742 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.93■□□□□ 0.78
LHX1P48742 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.93■□□□□ 0.78
LHX1P48742 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LHX1P48742 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LHX1P48742 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LHX1P48742 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LHX1P48742 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 HEIH-201ENST00000623091 1652 ntBASIC19.92■□□□□ 0.78
LHX1P48742 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.92■□□□□ 0.78
LHX1P48742 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX1P48742 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.92■□□□□ 0.78
LHX1P48742 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.92■□□□□ 0.78
LHX1P48742 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.92■□□□□ 0.78
LHX1P48742 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.92■□□□□ 0.78
LHX1P48742 AC112497.1-201ENST00000624824 639 ntBASIC19.92■□□□□ 0.78
LHX1P48742 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX1P48742 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.92■□□□□ 0.78
LHX1P48742 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX1P48742 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.92■□□□□ 0.78
LHX1P48742 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.92■□□□□ 0.78
LHX1P48742 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
LHX1P48742 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LHX1P48742 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 AL049812.1-201ENST00000432563 2267 ntBASIC19.91■□□□□ 0.78
LHX1P48742 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LHX1P48742 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LHX1P48742 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.91■□□□□ 0.78
LHX1P48742 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.91■□□□□ 0.78
LHX1P48742 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.91■□□□□ 0.78
LHX1P48742 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.91■□□□□ 0.78
LHX1P48742 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.91■□□□□ 0.78
LHX1P48742 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.91■□□□□ 0.78
LHX1P48742 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
LHX1P48742 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
LHX1P48742 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
LHX1P48742 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.91■□□□□ 0.78
LHX1P48742 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.91■□□□□ 0.78
LHX1P48742 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LHX1P48742 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.91■□□□□ 0.78
LHX1P48742 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.91■□□□□ 0.78
LHX1P48742 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LHX1P48742 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LHX1P48742 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX1P48742 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.9■□□□□ 0.78
LHX1P48742 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX1P48742 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX1P48742 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.9■□□□□ 0.78
LHX1P48742 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms