Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC1A6P48664 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC1A6P48664 AC026185.1-201ENST00000445748 174 ntBASIC18.52■□□□□ 0.56
SLC1A6P48664 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC1A6P48664 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.52■□□□□ 0.56
SLC1A6P48664 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC1A6P48664 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC1A6P48664 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
SLC1A6P48664 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC1A6P48664 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC1A6P48664 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC1A6P48664 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.52■□□□□ 0.55
SLC1A6P48664 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC1A6P48664 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC1A6P48664 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SLC1A6P48664 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC1A6P48664 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC1A6P48664 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SLC1A6P48664 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC1A6P48664 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC1A6P48664 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC1A6P48664 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 AL499627.1-201ENST00000569373 2188 ntBASIC18.51■□□□□ 0.55
SLC1A6P48664 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC1A6P48664 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC1A6P48664 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 PNMA6B-201ENST00000538162 1200 ntBASIC18.51■□□□□ 0.55
SLC1A6P48664 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC1A6P48664 AL160286.2-201ENST00000567150 934 ntBASIC18.51■□□□□ 0.55
SLC1A6P48664 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLC1A6P48664 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A6P48664 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLC1A6P48664 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC1A6P48664 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC1A6P48664 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A6P48664 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A6P48664 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A6P48664 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A6P48664 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC1A6P48664 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SLC1A6P48664 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
SLC1A6P48664 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC1A6P48664 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A6P48664 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A6P48664 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A6P48664 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A6P48664 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A6P48664 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC1A6P48664 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SLC1A6P48664 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A6P48664 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC1A6P48664 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC1A6P48664 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms