Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A12P48065 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC6A12P48065 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC6A12P48065 AC090164.3-201ENST00000610780 2143 ntBASIC18.17■□□□□ 0.5
SLC6A12P48065 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC6A12P48065 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A12P48065 AC104581.1-202ENST00000635932 2618 ntBASIC18.17■□□□□ 0.5
SLC6A12P48065 UNC93B2-201ENST00000285383 730 ntBASIC18.17■□□□□ 0.5
SLC6A12P48065 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC6A12P48065 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.17■□□□□ 0.5
SLC6A12P48065 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC6A12P48065 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC6A12P48065 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A12P48065 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SLC6A12P48065 AC079598.2-202ENST00000546624 1451 ntBASIC18.17■□□□□ 0.5
SLC6A12P48065 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC6A12P48065 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC6A12P48065 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SLC6A12P48065 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC6A12P48065 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC6A12P48065 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A12P48065 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A12P48065 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A12P48065 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 AL499627.1-201ENST00000569373 2188 ntBASIC18.16■□□□□ 0.5
SLC6A12P48065 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SLC6A12P48065 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC6A12P48065 AL023284.2-201ENST00000405850 579 ntBASIC18.16■□□□□ 0.5
SLC6A12P48065 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC6A12P48065 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SLC6A12P48065 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC6A12P48065 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 AC008556.1-201ENST00000610908 2040 ntBASIC18.16■□□□□ 0.5
SLC6A12P48065 AC073592.3-201ENST00000625118 1834 ntBASIC18.16■□□□□ 0.5
SLC6A12P48065 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC6A12P48065 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A12P48065 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.16■□□□□ 0.5
SLC6A12P48065 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC6A12P48065 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC6A12P48065 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC6A12P48065 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC6A12P48065 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 GPAT2P1-201ENST00000444924 1672 ntBASIC18.15■□□□□ 0.5
SLC6A12P48065 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A12P48065 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC6A12P48065 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC6A12P48065 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SLC6A12P48065 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC6A12P48065 FITM1-202ENST00000559294 800 ntBASIC18.15■□□□□ 0.5
SLC6A12P48065 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A12P48065 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC6A12P48065 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A12P48065 AP000525.1-201ENST00000608286 694 ntBASIC18.15■□□□□ 0.5
SLC6A12P48065 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A12P48065 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC6A12P48065 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC6A12P48065 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC6A12P48065 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC6A12P48065 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms