Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.94■□□□□ 0.62
CCNFP41002 AL353807.1-201ENST00000427475 662 ntBASIC18.94■□□□□ 0.62
CCNFP41002 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 UBE2SP1-201ENST00000450587 669 ntBASIC18.94■□□□□ 0.62
CCNFP41002 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.94■□□□□ 0.62
CCNFP41002 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.94■□□□□ 0.62
CCNFP41002 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.94■□□□□ 0.62
CCNFP41002 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCNFP41002 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCNFP41002 AC018470.1-201ENST00000624790 3129 ntBASIC18.94■□□□□ 0.62
CCNFP41002 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCNFP41002 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.94■□□□□ 0.62
CCNFP41002 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNFP41002 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCNFP41002 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CCNFP41002 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.93■□□□□ 0.62
CCNFP41002 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCNFP41002 AL158047.1-201ENST00000445918 881 ntBASIC18.93■□□□□ 0.62
CCNFP41002 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNFP41002 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNFP41002 RARRES2P10-201ENST00000564312 460 ntBASIC18.93■□□□□ 0.62
CCNFP41002 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.93■□□□□ 0.62
CCNFP41002 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.93■□□□□ 0.62
CCNFP41002 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CCNFP41002 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.93■□□□□ 0.62
CCNFP41002 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNFP41002 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNFP41002 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 AL135905.2-201ENST00000584934 1404 ntBASIC18.92■□□□□ 0.62
CCNFP41002 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCNFP41002 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNFP41002 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 ABALON-201ENST00000629058 1903 ntBASIC18.92■□□□□ 0.62
CCNFP41002 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.92■□□□□ 0.62
CCNFP41002 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CCNFP41002 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.92■□□□□ 0.62
CCNFP41002 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNFP41002 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.92■□□□□ 0.62
CCNFP41002 TSPY21P-201ENST00000433481 731 ntBASIC18.92■□□□□ 0.62
CCNFP41002 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.92■□□□□ 0.62
CCNFP41002 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.92■□□□□ 0.62
CCNFP41002 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNFP41002 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNFP41002 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
CCNFP41002 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCNFP41002 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.92■□□□□ 0.62
CCNFP41002 AC068880.1-201ENST00000507289 2297 ntBASIC18.91■□□□□ 0.62
CCNFP41002 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCNFP41002 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.91■□□□□ 0.62
CCNFP41002 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.91■□□□□ 0.62
CCNFP41002 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.91■□□□□ 0.62
CCNFP41002 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 AC106820.2-201ENST00000563775 3264 ntBASIC18.91■□□□□ 0.62
CCNFP41002 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.91■□□□□ 0.62
CCNFP41002 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.91■□□□□ 0.62
CCNFP41002 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNFP41002 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms