Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RXRBP28702 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RXRBP28702 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RXRBP28702 TP73-AS1-210ENST00000637775 1455 ntBASIC24.65■■□□□ 1.54
RXRBP28702 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.65■■□□□ 1.54
RXRBP28702 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RXRBP28702 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RXRBP28702 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
RXRBP28702 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RXRBP28702 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.65■■□□□ 1.54
RXRBP28702 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RXRBP28702 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC24.65■■□□□ 1.54
RXRBP28702 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC24.65■■□□□ 1.54
RXRBP28702 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC24.65■■□□□ 1.54
RXRBP28702 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.65■■□□□ 1.54
RXRBP28702 AC190387.1-201ENST00000551683 408 ntBASIC24.65■■□□□ 1.54
RXRBP28702 COPE-211ENST00000600932 1144 ntTSL 5 BASIC24.65■■□□□ 1.54
RXRBP28702 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RXRBP28702 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RXRBP28702 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RXRBP28702 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC24.65■■□□□ 1.54
RXRBP28702 SMG8-203ENST00000578922 2178 ntBASIC24.64■■□□□ 1.54
RXRBP28702 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RXRBP28702 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RXRBP28702 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC24.64■■□□□ 1.54
RXRBP28702 AC105339.3-201ENST00000560043 636 ntBASIC24.64■■□□□ 1.54
RXRBP28702 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC24.64■■□□□ 1.54
RXRBP28702 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC24.64■■□□□ 1.54
RXRBP28702 COX5A-206ENST00000568783 571 ntTSL 3 BASIC24.64■■□□□ 1.54
RXRBP28702 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC24.64■■□□□ 1.54
RXRBP28702 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC24.64■■□□□ 1.54
RXRBP28702 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RXRBP28702 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RXRBP28702 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RXRBP28702 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RXRBP28702 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RXRBP28702 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RXRBP28702 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC24.63■■□□□ 1.53
RXRBP28702 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC24.63■■□□□ 1.53
RXRBP28702 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC24.63■■□□□ 1.53
RXRBP28702 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RXRBP28702 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RXRBP28702 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
RXRBP28702 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.63■■□□□ 1.53
RXRBP28702 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RXRBP28702 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RXRBP28702 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
RXRBP28702 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RXRBP28702 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RXRBP28702 AC009947.1-201ENST00000444350 727 ntBASIC24.62■■□□□ 1.53
RXRBP28702 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC24.62■■□□□ 1.53
RXRBP28702 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RXRBP28702 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC24.62■■□□□ 1.53
RXRBP28702 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.62■■□□□ 1.53
RXRBP28702 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
RXRBP28702 AF228730.6-201ENST00000641497 218 ntBASIC24.62■■□□□ 1.53
RXRBP28702 AC084121.3-201ENST00000641716 218 ntBASIC24.62■■□□□ 1.53
RXRBP28702 AC105233.6-201ENST00000642093 218 ntBASIC24.62■■□□□ 1.53
RXRBP28702 C9orf163-202ENST00000624034 2573 ntBASIC24.62■■□□□ 1.53
RXRBP28702 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.62■■□□□ 1.53
RXRBP28702 AP005117.1-201ENST00000584346 1413 ntBASIC24.61■■□□□ 1.53
RXRBP28702 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.61■■□□□ 1.53
RXRBP28702 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC24.61■■□□□ 1.53
RXRBP28702 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RXRBP28702 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RXRBP28702 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RXRBP28702 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RXRBP28702 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RXRBP28702 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RXRBP28702 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC24.61■■□□□ 1.53
RXRBP28702 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC24.61■■□□□ 1.53
RXRBP28702 ALG1L5P-201ENST00000482043 771 ntBASIC24.61■■□□□ 1.53
RXRBP28702 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.61■■□□□ 1.53
RXRBP28702 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC24.61■■□□□ 1.53
RXRBP28702 AC025062.2-201ENST00000605477 670 ntBASIC24.61■■□□□ 1.53
RXRBP28702 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.61■■□□□ 1.53
RXRBP28702 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RXRBP28702 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
RXRBP28702 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RXRBP28702 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC24.6■■□□□ 1.53
RXRBP28702 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC24.6■■□□□ 1.53
RXRBP28702 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
RXRBP28702 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RXRBP28702 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RXRBP28702 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.59■■□□□ 1.53
RXRBP28702 AP002414.3-201ENST00000589352 1468 ntBASIC24.59■■□□□ 1.53
RXRBP28702 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
RXRBP28702 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RXRBP28702 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RXRBP28702 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms