Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 HEIH-201ENST00000623091 1652 ntBASIC19.01■□□□□ 0.63
HLA-DPA1P20036 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DPA1P20036 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DPA1P20036 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DPA1P20036 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DPA1P20036 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DPA1P20036 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DPA1P20036 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DPA1P20036 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DPA1P20036 AL355075.4-201ENST00000554988 638 ntBASIC19■□□□□ 0.63
HLA-DPA1P20036 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DPA1P20036 AC079598.2-202ENST00000546624 1451 ntBASIC19■□□□□ 0.63
HLA-DPA1P20036 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 AL031598.1-201ENST00000561511 1773 ntBASIC19■□□□□ 0.63
HLA-DPA1P20036 Z98044.1-201ENST00000632503 1764 ntBASIC19■□□□□ 0.63
HLA-DPA1P20036 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DPA1P20036 AC004408.2-201ENST00000623613 2777 ntBASIC19■□□□□ 0.63
HLA-DPA1P20036 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
HLA-DPA1P20036 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DPA1P20036 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DPA1P20036 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPA1P20036 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 FITM1-202ENST00000559294 800 ntBASIC18.99■□□□□ 0.63
HLA-DPA1P20036 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 AP000525.1-201ENST00000608286 694 ntBASIC18.99■□□□□ 0.63
HLA-DPA1P20036 AC068587.9-201ENST00000641814 219 ntBASIC18.99■□□□□ 0.63
HLA-DPA1P20036 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DPA1P20036 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DPA1P20036 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DPA1P20036 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms