Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
TOP2AP11388 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC32.93■■■□□ 2.86
TOP2AP11388 PPIE-208ENST00000470213 927 ntTSL 3 BASIC32.93■■■□□ 2.86
TOP2AP11388 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC32.93■■■□□ 2.86
TOP2AP11388 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
TOP2AP11388 UBQLN4P1-201ENST00000461599 1801 ntBASIC32.93■■■□□ 2.86
TOP2AP11388 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
TOP2AP11388 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC32.93■■■□□ 2.86
TOP2AP11388 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC32.93■■■□□ 2.86
TOP2AP11388 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
TOP2AP11388 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
TOP2AP11388 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
TOP2AP11388 NUS1P2-201ENST00000417358 873 ntBASIC32.92■■■□□ 2.86
TOP2AP11388 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC32.92■■■□□ 2.86
TOP2AP11388 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
TOP2AP11388 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC32.92■■■□□ 2.86
TOP2AP11388 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC32.92■■■□□ 2.86
TOP2AP11388 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC32.92■■■□□ 2.86
TOP2AP11388 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
TOP2AP11388 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
TOP2AP11388 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC32.92■■■□□ 2.86
TOP2AP11388 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
TOP2AP11388 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC32.92■■■□□ 2.86
TOP2AP11388 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC32.92■■■□□ 2.86
TOP2AP11388 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC32.92■■■□□ 2.86
TOP2AP11388 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
TOP2AP11388 BNIP3P18-201ENST00000593976 575 ntBASIC32.92■■■□□ 2.86
TOP2AP11388 AC024563.2-201ENST00000603282 481 ntBASIC32.92■■■□□ 2.86
TOP2AP11388 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC32.92■■■□□ 2.86
TOP2AP11388 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
TOP2AP11388 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
TOP2AP11388 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
TOP2AP11388 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
TOP2AP11388 PENK-208ENST00000523051 772 ntTSL 5 BASIC32.91■■■□□ 2.86
TOP2AP11388 AC006538.3-201ENST00000612495 578 ntBASIC32.91■■■□□ 2.86
TOP2AP11388 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
TOP2AP11388 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC32.91■■■□□ 2.86
TOP2AP11388 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
TOP2AP11388 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC32.91■■■□□ 2.86
TOP2AP11388 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
TOP2AP11388 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC32.9■■■□□ 2.86
TOP2AP11388 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC32.9■■■□□ 2.86
TOP2AP11388 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC32.9■■■□□ 2.86
TOP2AP11388 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC32.9■■■□□ 2.86
TOP2AP11388 CCNC-219ENST00000627680 896 ntTSL 5 BASIC32.9■■■□□ 2.86
TOP2AP11388 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC32.9■■■□□ 2.86
TOP2AP11388 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC32.9■■■□□ 2.86
TOP2AP11388 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
TOP2AP11388 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
TOP2AP11388 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
TOP2AP11388 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC32.89■■■□□ 2.86
TOP2AP11388 EMD-201ENST00000369835 966 ntTSL 3 BASIC32.89■■■□□ 2.86
TOP2AP11388 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
TOP2AP11388 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC32.89■■■□□ 2.86
TOP2AP11388 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC32.89■■■□□ 2.86
TOP2AP11388 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC32.89■■■□□ 2.86
TOP2AP11388 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
TOP2AP11388 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC32.89■■■□□ 2.86
TOP2AP11388 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
TOP2AP11388 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
TOP2AP11388 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
TOP2AP11388 FEM1AP3-201ENST00000403722 1741 ntBASIC32.89■■■□□ 2.86
TOP2AP11388 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC32.88■■■□□ 2.85
TOP2AP11388 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 LSM5-204ENST00000409909 740 ntTSL 2 BASIC32.88■■■□□ 2.85
TOP2AP11388 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC32.88■■■□□ 2.85
TOP2AP11388 AF238378.1-201ENST00000526806 358 ntBASIC32.88■■■□□ 2.85
TOP2AP11388 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
TOP2AP11388 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC32.88■■■□□ 2.85
TOP2AP11388 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 AC112907.3-201ENST00000577781 2400 ntBASIC32.88■■■□□ 2.85
TOP2AP11388 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC32.88■■■□□ 2.85
TOP2AP11388 KRT8P50-201ENST00000562022 1438 ntBASIC32.88■■■□□ 2.85
TOP2AP11388 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
TOP2AP11388 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC32.88■■■□□ 2.85
TOP2AP11388 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
TOP2AP11388 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
TOP2AP11388 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC32.87■■■□□ 2.85
TOP2AP11388 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms