Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.09■□□□□ 0.33
FREM3P0C091 FAM87A-204ENST00000613235 858 ntBASIC17.09■□□□□ 0.33
FREM3P0C091 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FREM3P0C091 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FREM3P0C091 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FREM3P0C091 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FREM3P0C091 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
FREM3P0C091 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FREM3P0C091 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FREM3P0C091 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FREM3P0C091 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.08■□□□□ 0.33
FREM3P0C091 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.08■□□□□ 0.33
FREM3P0C091 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.08■□□□□ 0.33
FREM3P0C091 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FREM3P0C091 KRT8P45-201ENST00000414328 1447 ntBASIC17.08■□□□□ 0.33
FREM3P0C091 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
FREM3P0C091 SLC25A1P2-201ENST00000430693 912 ntBASIC17.08■□□□□ 0.33
FREM3P0C091 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.08■□□□□ 0.33
FREM3P0C091 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FREM3P0C091 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.08■□□□□ 0.33
FREM3P0C091 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FREM3P0C091 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.08■□□□□ 0.33
FREM3P0C091 AC011558.1-201ENST00000623459 338 ntBASIC17.08■□□□□ 0.33
FREM3P0C091 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FREM3P0C091 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.08■□□□□ 0.32
FREM3P0C091 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 BX323043.1-201ENST00000641006 1765 ntBASIC17.08■□□□□ 0.32
FREM3P0C091 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
FREM3P0C091 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.08■□□□□ 0.32
FREM3P0C091 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.08■□□□□ 0.32
FREM3P0C091 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.08■□□□□ 0.32
FREM3P0C091 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.08■□□□□ 0.32
FREM3P0C091 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.08■□□□□ 0.32
FREM3P0C091 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.08■□□□□ 0.32
FREM3P0C091 NEK4P2-201ENST00000580004 1012 ntBASIC17.08■□□□□ 0.32
FREM3P0C091 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
FREM3P0C091 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.08■□□□□ 0.32
FREM3P0C091 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.08■□□□□ 0.32
FREM3P0C091 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
FREM3P0C091 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.07■□□□□ 0.32
FREM3P0C091 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
FREM3P0C091 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.07■□□□□ 0.32
FREM3P0C091 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
FREM3P0C091 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.07■□□□□ 0.32
FREM3P0C091 CR769767.2-201ENST00000622735 460 ntBASIC17.07■□□□□ 0.32
FREM3P0C091 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.07■□□□□ 0.32
FREM3P0C091 AC006333.2-201ENST00000607957 2099 ntBASIC17.07■□□□□ 0.32
FREM3P0C091 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
FREM3P0C091 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
FREM3P0C091 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.07■□□□□ 0.32
FREM3P0C091 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.07■□□□□ 0.32
FREM3P0C091 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FREM3P0C091 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
FREM3P0C091 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FREM3P0C091 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.06■□□□□ 0.32
FREM3P0C091 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.06■□□□□ 0.32
FREM3P0C091 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.06■□□□□ 0.32
FREM3P0C091 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.06■□□□□ 0.32
FREM3P0C091 AL441883.1-201ENST00000566170 1045 ntBASIC17.06■□□□□ 0.32
FREM3P0C091 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
FREM3P0C091 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FREM3P0C091 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.06■□□□□ 0.32
FREM3P0C091 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.06■□□□□ 0.32
FREM3P0C091 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.06■□□□□ 0.32
FREM3P0C091 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
FREM3P0C091 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 AC141586.3-201ENST00000562166 1838 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms