Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.65■□□□□ 0.9
COL1A2P08123 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL1A2P08123 AL391807.1-203ENST00000604392 2365 ntBASIC20.65■□□□□ 0.9
COL1A2P08123 AC006333.2-201ENST00000607957 2099 ntBASIC20.65■□□□□ 0.9
COL1A2P08123 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.65■□□□□ 0.9
COL1A2P08123 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.65■□□□□ 0.9
COL1A2P08123 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL1A2P08123 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COL1A2P08123 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.64■□□□□ 0.9
COL1A2P08123 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL1A2P08123 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL1A2P08123 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL1A2P08123 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL1A2P08123 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.64■□□□□ 0.89
COL1A2P08123 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.64■□□□□ 0.89
COL1A2P08123 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.64■□□□□ 0.89
COL1A2P08123 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.64■□□□□ 0.89
COL1A2P08123 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.64■□□□□ 0.89
COL1A2P08123 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.64■□□□□ 0.89
COL1A2P08123 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.64■□□□□ 0.89
COL1A2P08123 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL1A2P08123 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.64■□□□□ 0.89
COL1A2P08123 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.64■□□□□ 0.89
COL1A2P08123 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL1A2P08123 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL1A2P08123 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.64■□□□□ 0.89
COL1A2P08123 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
COL1A2P08123 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A2P08123 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A2P08123 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.63■□□□□ 0.89
COL1A2P08123 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COL1A2P08123 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A2P08123 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL1A2P08123 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COL1A2P08123 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COL1A2P08123 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COL1A2P08123 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A2P08123 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A2P08123 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.62■□□□□ 0.89
COL1A2P08123 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A2P08123 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A2P08123 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COL1A2P08123 ATP5G2P1-201ENST00000433580 426 ntBASIC20.62■□□□□ 0.89
COL1A2P08123 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.62■□□□□ 0.89
COL1A2P08123 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
COL1A2P08123 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A2P08123 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
COL1A2P08123 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A2P08123 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A2P08123 AC073130.3-201ENST00000624389 2278 ntBASIC20.62■□□□□ 0.89
COL1A2P08123 AC093525.10-201ENST00000625130 1569 ntBASIC20.62■□□□□ 0.89
COL1A2P08123 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A2P08123 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A2P08123 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A2P08123 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A2P08123 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COL1A2P08123 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.61■□□□□ 0.89
COL1A2P08123 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL1A2P08123 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 MIR662-201ENST00000384847 95 ntBASIC20.61■□□□□ 0.89
COL1A2P08123 PVRIG2P-201ENST00000435460 978 ntBASIC20.61■□□□□ 0.89
COL1A2P08123 KRT18P56-201ENST00000507275 550 ntBASIC20.61■□□□□ 0.89
COL1A2P08123 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.61■□□□□ 0.89
COL1A2P08123 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.61■□□□□ 0.89
COL1A2P08123 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COL1A2P08123 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.61■□□□□ 0.89
COL1A2P08123 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.61■□□□□ 0.89
COL1A2P08123 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.61■□□□□ 0.89
COL1A2P08123 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.61■□□□□ 0.89
COL1A2P08123 Z98044.1-201ENST00000632503 1764 ntBASIC20.61■□□□□ 0.89
COL1A2P08123 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.61■□□□□ 0.89
COL1A2P08123 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A2P08123 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COL1A2P08123 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COL1A2P08123 AL162741.1-201ENST00000565563 1558 ntBASIC20.61■□□□□ 0.89
COL1A2P08123 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.6■□□□□ 0.89
COL1A2P08123 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 HCG4P8-203ENST00000443049 980 ntBASIC20.6■□□□□ 0.89
COL1A2P08123 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms