Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL391422.3-201ENST00000603791 2761 ntBASIC19.9■□□□□ 0.78
RB1P06400 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RB1P06400 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RB1P06400 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RB1P06400 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.89■□□□□ 0.77
RB1P06400 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RB1P06400 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 IGHGP-201ENST00000390555 1178 ntBASIC19.89■□□□□ 0.77
RB1P06400 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RB1P06400 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.89■□□□□ 0.77
RB1P06400 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
RB1P06400 VENTXP7-201ENST00000475503 772 ntBASIC19.89■□□□□ 0.77
RB1P06400 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.89■□□□□ 0.77
RB1P06400 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 AC008556.1-201ENST00000610908 2040 ntBASIC19.89■□□□□ 0.77
RB1P06400 AC120114.3-201ENST00000611923 658 ntBASIC19.89■□□□□ 0.77
RB1P06400 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.89■□□□□ 0.77
RB1P06400 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RB1P06400 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RB1P06400 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
RB1P06400 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RB1P06400 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.88■□□□□ 0.77
RB1P06400 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.88■□□□□ 0.77
RB1P06400 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.88■□□□□ 0.77
RB1P06400 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.88■□□□□ 0.77
RB1P06400 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 AL590627.1-203ENST00000421194 1026 ntBASIC19.88■□□□□ 0.77
RB1P06400 RN7SL606P-201ENST00000472779 293 ntBASIC19.88■□□□□ 0.77
RB1P06400 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.88■□□□□ 0.77
RB1P06400 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.88■□□□□ 0.77
RB1P06400 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.88■□□□□ 0.77
RB1P06400 REXO1L6P-202ENST00000619970 1078 ntBASIC19.88■□□□□ 0.77
RB1P06400 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RB1P06400 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RB1P06400 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.87■□□□□ 0.77
RB1P06400 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.87■□□□□ 0.77
RB1P06400 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.87■□□□□ 0.77
RB1P06400 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.87■□□□□ 0.77
RB1P06400 AKR1C7P-201ENST00000305623 895 ntBASIC19.87■□□□□ 0.77
RB1P06400 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.87■□□□□ 0.77
RB1P06400 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.87■□□□□ 0.77
RB1P06400 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.87■□□□□ 0.77
RB1P06400 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
RB1P06400 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.87■□□□□ 0.77
RB1P06400 AL671883.3-201ENST00000603274 991 ntBASIC19.87■□□□□ 0.77
RB1P06400 AL592071.1-201ENST00000611956 408 ntBASIC19.87■□□□□ 0.77
RB1P06400 AC124864.1-201ENST00000623408 392 ntBASIC19.87■□□□□ 0.77
RB1P06400 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.87■□□□□ 0.77
RB1P06400 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.87■□□□□ 0.77
RB1P06400 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.87■□□□□ 0.77
RB1P06400 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RB1P06400 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.87■□□□□ 0.77
RB1P06400 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.87■□□□□ 0.77
RB1P06400 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RB1P06400 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
RB1P06400 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.86■□□□□ 0.77
RB1P06400 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms