Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.48■■□□□ 1.19
POLR3DP05423 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
POLR3DP05423 CR769767.2-201ENST00000622735 460 ntBASIC22.48■■□□□ 1.19
POLR3DP05423 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3DP05423 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3DP05423 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3DP05423 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.48■■□□□ 1.19
POLR3DP05423 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
POLR3DP05423 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3DP05423 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3DP05423 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.48■■□□□ 1.19
POLR3DP05423 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3DP05423 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.48■■□□□ 1.19
POLR3DP05423 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.47■■□□□ 1.19
POLR3DP05423 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.47■■□□□ 1.19
POLR3DP05423 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.47■■□□□ 1.19
POLR3DP05423 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 AP000523.1-201ENST00000398242 1049 ntBASIC22.47■■□□□ 1.19
POLR3DP05423 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
POLR3DP05423 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.47■■□□□ 1.19
POLR3DP05423 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
POLR3DP05423 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.47■■□□□ 1.19
POLR3DP05423 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.47■■□□□ 1.19
POLR3DP05423 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22.47■■□□□ 1.19
POLR3DP05423 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
POLR3DP05423 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3DP05423 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
POLR3DP05423 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
POLR3DP05423 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 AL023284.2-201ENST00000405850 579 ntBASIC22.46■■□□□ 1.19
POLR3DP05423 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.46■■□□□ 1.19
POLR3DP05423 AC018445.3-201ENST00000624177 1945 ntBASIC22.46■■□□□ 1.19
POLR3DP05423 KRT8P3-201ENST00000519669 1449 ntBASIC22.46■■□□□ 1.19
POLR3DP05423 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.46■■□□□ 1.19
POLR3DP05423 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.46■■□□□ 1.19
POLR3DP05423 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3DP05423 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
POLR3DP05423 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.45■■□□□ 1.19
POLR3DP05423 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
POLR3DP05423 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.45■■□□□ 1.18
POLR3DP05423 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.45■■□□□ 1.18
POLR3DP05423 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.45■■□□□ 1.18
POLR3DP05423 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.45■■□□□ 1.18
POLR3DP05423 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.45■■□□□ 1.18
POLR3DP05423 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.45■■□□□ 1.18
POLR3DP05423 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.45■■□□□ 1.18
POLR3DP05423 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 AC120498.9-201ENST00000339021 3867 ntBASIC22.45■■□□□ 1.18
POLR3DP05423 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
POLR3DP05423 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3DP05423 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.45■■□□□ 1.18
POLR3DP05423 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.45■■□□□ 1.18
POLR3DP05423 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3DP05423 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.44■■□□□ 1.18
POLR3DP05423 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3DP05423 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3DP05423 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
POLR3DP05423 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3DP05423 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3DP05423 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
POLR3DP05423 HOMER2P1-201ENST00000455653 964 ntBASIC22.44■■□□□ 1.18
POLR3DP05423 AL359075.1-203ENST00000462729 1002 ntBASIC22.44■■□□□ 1.18
POLR3DP05423 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.44■■□□□ 1.18
POLR3DP05423 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.44■■□□□ 1.18
POLR3DP05423 NEK4P2-201ENST00000580004 1012 ntBASIC22.44■■□□□ 1.18
POLR3DP05423 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
POLR3DP05423 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.44■■□□□ 1.18
POLR3DP05423 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3DP05423 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
POLR3DP05423 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.43■■□□□ 1.18
POLR3DP05423 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.43■■□□□ 1.18
POLR3DP05423 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
POLR3DP05423 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.43■■□□□ 1.18
POLR3DP05423 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms