Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC011767.1-201ENST00000617410 1153 ntBASIC15.83■□□□□ 0.12
CD74P04233 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 AC231657.2-201ENST00000624556 255 ntBASIC15.83■□□□□ 0.12
CD74P04233 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 AC106820.2-201ENST00000563775 3264 ntBASIC15.83■□□□□ 0.12
CD74P04233 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CD74P04233 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CD74P04233 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.83■□□□□ 0.12
CD74P04233 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.83■□□□□ 0.12
CD74P04233 AC009053.2-201ENST00000563701 2365 ntBASIC15.83■□□□□ 0.12
CD74P04233 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CD74P04233 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD74P04233 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CD74P04233 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.82■□□□□ 0.12
CD74P04233 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.82■□□□□ 0.12
CD74P04233 TUBB8P6-201ENST00000436895 1288 ntBASIC15.82■□□□□ 0.12
CD74P04233 TSPY23P-201ENST00000440136 739 ntBASIC15.82■□□□□ 0.12
CD74P04233 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.82■□□□□ 0.12
CD74P04233 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 AL121906.2-201ENST00000621597 723 ntBASIC15.82■□□□□ 0.12
CD74P04233 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.82■□□□□ 0.12
CD74P04233 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.82■□□□□ 0.12
CD74P04233 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CD74P04233 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.82■□□□□ 0.12
CD74P04233 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.82■□□□□ 0.12
CD74P04233 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD74P04233 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CD74P04233 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.82■□□□□ 0.12
CD74P04233 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.82■□□□□ 0.12
CD74P04233 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.82■□□□□ 0.12
CD74P04233 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD74P04233 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD74P04233 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CD74P04233 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CD74P04233 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.82■□□□□ 0.12
CD74P04233 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD74P04233 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD74P04233 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD74P04233 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD74P04233 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CD74P04233 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.81■□□□□ 0.12
CD74P04233 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD74P04233 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD74P04233 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.81■□□□□ 0.12
CD74P04233 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD74P04233 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.81■□□□□ 0.12
CD74P04233 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.81■□□□□ 0.12
CD74P04233 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.81■□□□□ 0.12
CD74P04233 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD74P04233 MYC-208ENST00000641036 567 ntBASIC15.81■□□□□ 0.12
CD74P04233 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CD74P04233 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.81■□□□□ 0.12
CD74P04233 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD74P04233 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD74P04233 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CD74P04233 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 AC012317.2-201ENST00000623305 2251 ntBASIC15.8■□□□□ 0.12
CD74P04233 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CD74P04233 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.8■□□□□ 0.12
CD74P04233 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD74P04233 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CD74P04233 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.8■□□□□ 0.12
CD74P04233 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CD74P04233 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.8■□□□□ 0.12
CD74P04233 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 AC007322.1-201ENST00000426983 750 ntBASIC15.8■□□□□ 0.12
CD74P04233 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD74P04233 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.8■□□□□ 0.12
CD74P04233 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.8■□□□□ 0.12
CD74P04233 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.8■□□□□ 0.12
CD74P04233 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.8■□□□□ 0.12
CD74P04233 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD74P04233 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms