Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQA2P01906 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 AC104581.1-202ENST00000635932 2618 ntBASIC16.92■□□□□ 0.3
HLA-DQA2P01906 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 TSPY21P-201ENST00000433481 731 ntBASIC16.92■□□□□ 0.3
HLA-DQA2P01906 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 MTDHP1-201ENST00000605323 784 ntBASIC16.92■□□□□ 0.3
HLA-DQA2P01906 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 Z98044.1-201ENST00000632503 1764 ntBASIC16.92■□□□□ 0.3
HLA-DQA2P01906 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQA2P01906 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 KRASP1-201ENST00000407852 552 ntBASIC16.91■□□□□ 0.3
HLA-DQA2P01906 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 HLA-A-209ENST00000638375 975 ntBASIC16.91■□□□□ 0.3
HLA-DQA2P01906 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQA2P01906 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 AC233263.1-201ENST00000578059 224 ntBASIC16.9■□□□□ 0.3
HLA-DQA2P01906 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQA2P01906 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms