Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFBP01127 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.91■□□□□ 0.62
PDGFBP01127 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFBP01127 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
PDGFBP01127 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFBP01127 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFBP01127 POM121L3P-201ENST00000419331 1163 ntBASIC18.91■□□□□ 0.62
PDGFBP01127 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.91■□□□□ 0.62
PDGFBP01127 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.91■□□□□ 0.62
PDGFBP01127 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFBP01127 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFBP01127 ZNF815P-204ENST00000434898 1737 ntBASIC18.91■□□□□ 0.62
PDGFBP01127 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFBP01127 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDGFBP01127 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFBP01127 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFBP01127 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFBP01127 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.9■□□□□ 0.62
PDGFBP01127 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.9■□□□□ 0.62
PDGFBP01127 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.9■□□□□ 0.62
PDGFBP01127 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFBP01127 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFBP01127 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.9■□□□□ 0.62
PDGFBP01127 AC011840.4-201ENST00000578471 627 ntBASIC18.9■□□□□ 0.62
PDGFBP01127 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.9■□□□□ 0.62
PDGFBP01127 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDGFBP01127 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFBP01127 KRT8P3-201ENST00000519669 1449 ntBASIC18.9■□□□□ 0.62
PDGFBP01127 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PDGFBP01127 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.9■□□□□ 0.62
PDGFBP01127 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFBP01127 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDGFBP01127 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.89■□□□□ 0.62
PDGFBP01127 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDGFBP01127 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDGFBP01127 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFBP01127 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.89■□□□□ 0.61
PDGFBP01127 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.89■□□□□ 0.61
PDGFBP01127 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 AC112482.1-201ENST00000492080 688 ntBASIC18.89■□□□□ 0.61
PDGFBP01127 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFBP01127 AC096582.2-201ENST00000510860 516 ntBASIC18.89■□□□□ 0.61
PDGFBP01127 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFBP01127 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFBP01127 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFBP01127 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFBP01127 AC027601.4-201ENST00000611259 610 ntBASIC18.89■□□□□ 0.61
PDGFBP01127 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 AC008556.1-201ENST00000610908 2040 ntBASIC18.89■□□□□ 0.61
PDGFBP01127 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDGFBP01127 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFBP01127 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDGFBP01127 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
PDGFBP01127 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.88■□□□□ 0.61
PDGFBP01127 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDGFBP01127 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PDGFBP01127 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.88■□□□□ 0.61
PDGFBP01127 MED15P5-201ENST00000423150 992 ntBASIC18.88■□□□□ 0.61
PDGFBP01127 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.88■□□□□ 0.61
PDGFBP01127 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.88■□□□□ 0.61
PDGFBP01127 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.88■□□□□ 0.61
PDGFBP01127 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.88■□□□□ 0.61
PDGFBP01127 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.88■□□□□ 0.61
PDGFBP01127 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDGFBP01127 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.88■□□□□ 0.61
PDGFBP01127 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDGFBP01127 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.88■□□□□ 0.61
PDGFBP01127 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms