Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN3O95197 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.83■□□□□ 0.76
RTN3O95197 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.82■□□□□ 0.76
RTN3O95197 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.82■□□□□ 0.76
RTN3O95197 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RTN3O95197 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.82■□□□□ 0.76
RTN3O95197 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 IRX1P1-201ENST00000438849 1838 ntBASIC19.82■□□□□ 0.76
RTN3O95197 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RTN3O95197 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.82■□□□□ 0.76
RTN3O95197 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.82■□□□□ 0.76
RTN3O95197 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.82■□□□□ 0.76
RTN3O95197 WWOX-216ENST00000569818 525 ntBASIC19.82■□□□□ 0.76
RTN3O95197 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.82■□□□□ 0.76
RTN3O95197 AC140113.3-201ENST00000605663 199 ntBASIC19.82■□□□□ 0.76
RTN3O95197 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RTN3O95197 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN3O95197 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RTN3O95197 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.82■□□□□ 0.76
RTN3O95197 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RTN3O95197 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.82■□□□□ 0.76
RTN3O95197 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 GPAT2P1-201ENST00000444924 1672 ntBASIC19.81■□□□□ 0.76
RTN3O95197 AC093484.2-201ENST00000580996 2166 ntBASIC19.81■□□□□ 0.76
RTN3O95197 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
RTN3O95197 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.81■□□□□ 0.76
RTN3O95197 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 AL023284.2-201ENST00000405850 579 ntBASIC19.81■□□□□ 0.76
RTN3O95197 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.81■□□□□ 0.76
RTN3O95197 KRT18P35-201ENST00000510488 1269 ntBASIC19.81■□□□□ 0.76
RTN3O95197 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 AL445228.2-201ENST00000605589 952 ntBASIC19.81■□□□□ 0.76
RTN3O95197 CR769767.2-201ENST00000622735 460 ntBASIC19.81■□□□□ 0.76
RTN3O95197 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN3O95197 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN3O95197 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 AL032819.2-201ENST00000624543 2162 ntBASIC19.81■□□□□ 0.76
RTN3O95197 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RTN3O95197 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN3O95197 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN3O95197 AC005082.1-201ENST00000413042 2259 ntBASIC19.81■□□□□ 0.76
RTN3O95197 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN3O95197 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
RTN3O95197 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
RTN3O95197 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.8■□□□□ 0.76
RTN3O95197 TSPY5P-201ENST00000426936 936 ntBASIC19.8■□□□□ 0.76
RTN3O95197 AC009947.2-201ENST00000444014 672 ntBASIC19.8■□□□□ 0.76
RTN3O95197 MCCD1P1-208ENST00000445732 328 ntBASIC19.8■□□□□ 0.76
RTN3O95197 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RTN3O95197 AC063952.2-201ENST00000498792 1227 ntBASIC19.8■□□□□ 0.76
RTN3O95197 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN3O95197 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN3O95197 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RTN3O95197 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN3O95197 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.79■□□□□ 0.76
RTN3O95197 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTN3O95197 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.79■□□□□ 0.76
RTN3O95197 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.79■□□□□ 0.76
RTN3O95197 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.79■□□□□ 0.76
RTN3O95197 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.79■□□□□ 0.76
RTN3O95197 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN3O95197 AC022616.7-201ENST00000525383 220 ntBASIC19.79■□□□□ 0.76
RTN3O95197 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.79■□□□□ 0.76
RTN3O95197 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms