Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CCNKO75909 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.33■□□□□ 0.21
CCNKO75909 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
CCNKO75909 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCNKO75909 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNKO75909 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCNKO75909 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNKO75909 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.33■□□□□ 0.2
CCNKO75909 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CCNKO75909 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 UBALD1-205ENST00000590891 2641 ntBASIC16.33■□□□□ 0.2
CCNKO75909 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCNKO75909 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCNKO75909 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.33■□□□□ 0.2
CCNKO75909 IRX1P1-201ENST00000438849 1838 ntBASIC16.33■□□□□ 0.2
CCNKO75909 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.33■□□□□ 0.2
CCNKO75909 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCNKO75909 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNKO75909 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNKO75909 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNKO75909 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNKO75909 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.32■□□□□ 0.2
CCNKO75909 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.32■□□□□ 0.2
CCNKO75909 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.32■□□□□ 0.2
CCNKO75909 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCNKO75909 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CCNKO75909 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCNKO75909 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 SLC25A6P5-201ENST00000435663 894 ntBASIC16.31■□□□□ 0.2
CCNKO75909 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.31■□□□□ 0.2
CCNKO75909 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCNKO75909 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 AC116050.2-201ENST00000612102 1779 ntBASIC16.31■□□□□ 0.2
CCNKO75909 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CCNKO75909 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCNKO75909 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNKO75909 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCNKO75909 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCNKO75909 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNKO75909 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNKO75909 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.3■□□□□ 0.2
CCNKO75909 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCNKO75909 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms