Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 HEIH-201ENST00000623091 1652 ntBASIC19.24■□□□□ 0.67
CLDN11O75508 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN11O75508 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN11O75508 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.23■□□□□ 0.67
CLDN11O75508 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN11O75508 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.23■□□□□ 0.67
CLDN11O75508 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.23■□□□□ 0.67
CLDN11O75508 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN11O75508 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN11O75508 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN11O75508 YBX1P2-201ENST00000489612 999 ntBASIC19.23■□□□□ 0.67
CLDN11O75508 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.23■□□□□ 0.67
CLDN11O75508 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN11O75508 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CLDN11O75508 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN11O75508 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN11O75508 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN11O75508 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN11O75508 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN11O75508 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN11O75508 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN11O75508 MIR564-202ENST00000385049 94 ntBASIC19.22■□□□□ 0.67
CLDN11O75508 RNF152P1-201ENST00000397754 604 ntBASIC19.22■□□□□ 0.67
CLDN11O75508 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN11O75508 DUX4L26-201ENST00000489078 1255 ntBASIC19.22■□□□□ 0.67
CLDN11O75508 AL049597.2-201ENST00000565575 961 ntBASIC19.22■□□□□ 0.67
CLDN11O75508 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN11O75508 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN11O75508 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLDN11O75508 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN11O75508 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN11O75508 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN11O75508 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN11O75508 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLDN11O75508 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN11O75508 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN11O75508 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN11O75508 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN11O75508 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN11O75508 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 AC011558.1-201ENST00000623459 338 ntBASIC19.21■□□□□ 0.67
CLDN11O75508 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLDN11O75508 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN11O75508 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN11O75508 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN11O75508 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN11O75508 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLDN11O75508 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms