Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC43A1O75387 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC43A1O75387 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC43A1O75387 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC43A1O75387 CR392000.1-201ENST00000624770 1228 ntBASIC17.08■□□□□ 0.32
SLC43A1O75387 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC43A1O75387 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC43A1O75387 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC43A1O75387 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC43A1O75387 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 MIR718-201ENST00000390190 70 ntBASIC17.07■□□□□ 0.32
SLC43A1O75387 RPS2P55-201ENST00000397318 883 ntBASIC17.07■□□□□ 0.32
SLC43A1O75387 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 AC012618.2-201ENST00000428058 849 ntBASIC17.07■□□□□ 0.32
SLC43A1O75387 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 AC107956.1-201ENST00000494359 873 ntBASIC17.07■□□□□ 0.32
SLC43A1O75387 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC43A1O75387 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC43A1O75387 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLC43A1O75387 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC43A1O75387 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC43A1O75387 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 SDHAP1-207ENST00000440850 2000 ntBASIC17.06■□□□□ 0.32
SLC43A1O75387 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC43A1O75387 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SLC43A1O75387 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SLC43A1O75387 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC43A1O75387 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC43A1O75387 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC43A1O75387 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC43A1O75387 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC43A1O75387 AL031985.4-201ENST00000642138 673 ntBASIC17.06■□□□□ 0.32
SLC43A1O75387 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SLC43A1O75387 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC43A1O75387 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC43A1O75387 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC43A1O75387 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SLC43A1O75387 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC43A1O75387 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC43A1O75387 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC43A1O75387 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC43A1O75387 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.05■□□□□ 0.32
SLC43A1O75387 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.05■□□□□ 0.32
SLC43A1O75387 AC008550.1-201ENST00000511500 884 ntBASIC17.05■□□□□ 0.32
SLC43A1O75387 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC43A1O75387 AC233702.5-201ENST00000584107 538 ntBASIC17.05■□□□□ 0.32
SLC43A1O75387 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC43A1O75387 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC43A1O75387 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms