Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.55■□□□□ 0.56
SNX3O60493 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNX3O60493 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX3O60493 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.55■□□□□ 0.56
SNX3O60493 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX3O60493 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX3O60493 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX3O60493 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX3O60493 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.55■□□□□ 0.56
SNX3O60493 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX3O60493 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX3O60493 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX3O60493 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX3O60493 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SNX3O60493 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
SNX3O60493 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX3O60493 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
SNX3O60493 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNX3O60493 HEIH-201ENST00000623091 1652 ntBASIC18.54■□□□□ 0.56
SNX3O60493 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
SNX3O60493 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNX3O60493 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SNX3O60493 KRT18P14-201ENST00000534205 1250 ntBASIC18.54■□□□□ 0.56
SNX3O60493 KRT18P61-201ENST00000585825 1298 ntBASIC18.54■□□□□ 0.56
SNX3O60493 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.54■□□□□ 0.56
SNX3O60493 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX3O60493 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNX3O60493 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SNX3O60493 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNX3O60493 PP12613-201ENST00000424958 2230 ntBASIC18.53■□□□□ 0.56
SNX3O60493 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 AC138932.1-201ENST00000534164 6830 ntBASIC18.53■□□□□ 0.56
SNX3O60493 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.53■□□□□ 0.56
SNX3O60493 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SNX3O60493 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX3O60493 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX3O60493 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.52■□□□□ 0.56
SNX3O60493 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
SNX3O60493 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SNX3O60493 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.52■□□□□ 0.56
SNX3O60493 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.52■□□□□ 0.56
SNX3O60493 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.52■□□□□ 0.56
SNX3O60493 AL589743.5-201ENST00000616611 1050 ntBASIC18.52■□□□□ 0.56
SNX3O60493 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.52■□□□□ 0.56
SNX3O60493 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNX3O60493 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNX3O60493 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNX3O60493 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNX3O60493 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
SNX3O60493 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.52■□□□□ 0.55
SNX3O60493 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNX3O60493 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SNX3O60493 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.52■□□□□ 0.55
SNX3O60493 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNX3O60493 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SNX3O60493 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNX3O60493 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.51■□□□□ 0.55
SNX3O60493 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNX3O60493 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
SNX3O60493 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms