Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SSSCA1O60232 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SSSCA1O60232 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SSSCA1O60232 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SSSCA1O60232 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
SSSCA1O60232 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SSSCA1O60232 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SSSCA1O60232 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SSSCA1O60232 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.36■□□□□ 0.05
SSSCA1O60232 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SSSCA1O60232 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.36■□□□□ 0.05
SSSCA1O60232 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SSSCA1O60232 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.36■□□□□ 0.05
SSSCA1O60232 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 AC137761.2-201ENST00000561729 223 ntBASIC15.36■□□□□ 0.05
SSSCA1O60232 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.36■□□□□ 0.05
SSSCA1O60232 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 AC145350.3-201ENST00000569033 163 ntBASIC15.36■□□□□ 0.05
SSSCA1O60232 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.36■□□□□ 0.05
SSSCA1O60232 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SSSCA1O60232 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SSSCA1O60232 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SSSCA1O60232 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SSSCA1O60232 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 GPX1P1-201ENST00000388829 606 ntBASIC15.35■□□□□ 0.05
SSSCA1O60232 AL390719.1-204ENST00000412397 1219 ntBASIC15.35■□□□□ 0.05
SSSCA1O60232 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.35■□□□□ 0.05
SSSCA1O60232 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SSSCA1O60232 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.35■□□□□ 0.05
SSSCA1O60232 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSSCA1O60232 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SSSCA1O60232 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
SSSCA1O60232 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SSSCA1O60232 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.34■□□□□ 0.05
SSSCA1O60232 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SSSCA1O60232 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.34■□□□□ 0.05
SSSCA1O60232 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.34■□□□□ 0.05
SSSCA1O60232 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.34■□□□□ 0.05
SSSCA1O60232 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.34■□□□□ 0.05
SSSCA1O60232 DUX4L16-201ENST00000555130 1264 ntBASIC15.34■□□□□ 0.05
SSSCA1O60232 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.34■□□□□ 0.05
SSSCA1O60232 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.34■□□□□ 0.05
SSSCA1O60232 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSSCA1O60232 BID-214ENST00000617586 542 ntTSL 5 BASIC15.34■□□□□ 0.05
SSSCA1O60232 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.34■□□□□ 0.05
SSSCA1O60232 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.34■□□□□ 0.05
SSSCA1O60232 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
SSSCA1O60232 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms