Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXS1O43638 TSPY5P-201ENST00000426936 936 ntBASIC17.72■□□□□ 0.43
FOXS1O43638 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXS1O43638 AC063952.2-201ENST00000498792 1227 ntBASIC17.72■□□□□ 0.43
FOXS1O43638 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 AC140113.3-201ENST00000605663 199 ntBASIC17.72■□□□□ 0.43
FOXS1O43638 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXS1O43638 AL031432.5-201ENST00000641059 760 ntBASIC17.72■□□□□ 0.43
FOXS1O43638 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FOXS1O43638 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXS1O43638 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXS1O43638 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXS1O43638 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXS1O43638 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXS1O43638 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.71■□□□□ 0.43
FOXS1O43638 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.71■□□□□ 0.43
FOXS1O43638 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXS1O43638 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.71■□□□□ 0.43
FOXS1O43638 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXS1O43638 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
FOXS1O43638 AC083906.6-201ENST00000641366 219 ntBASIC17.71■□□□□ 0.43
FOXS1O43638 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
FOXS1O43638 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXS1O43638 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXS1O43638 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FOXS1O43638 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FOXS1O43638 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXS1O43638 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
FOXS1O43638 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.71■□□□□ 0.42
FOXS1O43638 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FOXS1O43638 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXS1O43638 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
FOXS1O43638 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXS1O43638 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXS1O43638 AP000523.1-201ENST00000398242 1049 ntBASIC17.7■□□□□ 0.42
FOXS1O43638 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
FOXS1O43638 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXS1O43638 GCSHP2-201ENST00000560971 527 ntBASIC17.7■□□□□ 0.42
FOXS1O43638 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.7■□□□□ 0.42
FOXS1O43638 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 MTMR9LP-203ENST00000426597 1545 ntBASIC17.7■□□□□ 0.42
FOXS1O43638 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXS1O43638 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXS1O43638 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXS1O43638 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXS1O43638 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
FOXS1O43638 AC006333.2-201ENST00000607957 2099 ntBASIC17.69■□□□□ 0.42
FOXS1O43638 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXS1O43638 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
FOXS1O43638 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXS1O43638 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXS1O43638 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXS1O43638 AC022616.7-201ENST00000525383 220 ntBASIC17.69■□□□□ 0.42
FOXS1O43638 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXS1O43638 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.69■□□□□ 0.42
FOXS1O43638 AL590326.2-201ENST00000625139 305 ntBASIC17.69■□□□□ 0.42
FOXS1O43638 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXS1O43638 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXS1O43638 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms