Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK2O43353 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK2O43353 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK2O43353 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.13■□□□□ 0.65
RIPK2O43353 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RIPK2O43353 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
RIPK2O43353 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.13■□□□□ 0.65
RIPK2O43353 AC091874.3-201ENST00000512672 1195 ntBASIC19.13■□□□□ 0.65
RIPK2O43353 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.13■□□□□ 0.65
RIPK2O43353 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 AC092368.3-202ENST00000574180 1591 ntBASIC19.13■□□□□ 0.65
RIPK2O43353 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RIPK2O43353 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RIPK2O43353 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
RIPK2O43353 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RIPK2O43353 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RIPK2O43353 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.12■□□□□ 0.65
RIPK2O43353 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RIPK2O43353 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RIPK2O43353 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.12■□□□□ 0.65
RIPK2O43353 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.12■□□□□ 0.65
RIPK2O43353 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.12■□□□□ 0.65
RIPK2O43353 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.12■□□□□ 0.65
RIPK2O43353 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.12■□□□□ 0.65
RIPK2O43353 AL160286.2-201ENST00000567150 934 ntBASIC19.12■□□□□ 0.65
RIPK2O43353 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.12■□□□□ 0.65
RIPK2O43353 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RIPK2O43353 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RIPK2O43353 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RIPK2O43353 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.11■□□□□ 0.65
RIPK2O43353 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.11■□□□□ 0.65
RIPK2O43353 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 AC120498.8-201ENST00000614275 531 ntBASIC19.11■□□□□ 0.65
RIPK2O43353 AC073111.5-205ENST00000641717 521 ntBASIC19.11■□□□□ 0.65
RIPK2O43353 AC068587.9-201ENST00000641814 219 ntBASIC19.11■□□□□ 0.65
RIPK2O43353 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 GNAS-203ENST00000306120 1878 ntBASIC19.11■□□□□ 0.65
RIPK2O43353 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.11■□□□□ 0.65
RIPK2O43353 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RIPK2O43353 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RIPK2O43353 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
RIPK2O43353 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.1■□□□□ 0.65
RIPK2O43353 AC092118.2-201ENST00000613495 667 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms