Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.47■□□□□ 0.87
TNRC18O15417 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.47■□□□□ 0.87
TNRC18O15417 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNRC18O15417 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TNRC18O15417 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.46■□□□□ 0.87
TNRC18O15417 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TNRC18O15417 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TNRC18O15417 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.46■□□□□ 0.87
TNRC18O15417 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TNRC18O15417 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.46■□□□□ 0.87
TNRC18O15417 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.46■□□□□ 0.87
TNRC18O15417 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.46■□□□□ 0.87
TNRC18O15417 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
TNRC18O15417 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
TNRC18O15417 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.46■□□□□ 0.87
TNRC18O15417 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.46■□□□□ 0.87
TNRC18O15417 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.46■□□□□ 0.87
TNRC18O15417 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.46■□□□□ 0.87
TNRC18O15417 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.46■□□□□ 0.87
TNRC18O15417 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.46■□□□□ 0.87
TNRC18O15417 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.46■□□□□ 0.87
TNRC18O15417 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.46■□□□□ 0.87
TNRC18O15417 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.46■□□□□ 0.87
TNRC18O15417 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 AL390955.2-201ENST00000603032 514 ntBASIC20.46■□□□□ 0.87
TNRC18O15417 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNRC18O15417 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.45■□□□□ 0.87
TNRC18O15417 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.45■□□□□ 0.87
TNRC18O15417 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TNRC18O15417 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
TNRC18O15417 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TNRC18O15417 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 AL023284.2-201ENST00000405850 579 ntBASIC20.45■□□□□ 0.86
TNRC18O15417 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.45■□□□□ 0.86
TNRC18O15417 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 RN7SL204P-201ENST00000582831 262 ntBASIC20.45■□□□□ 0.86
TNRC18O15417 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.45■□□□□ 0.86
TNRC18O15417 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.45■□□□□ 0.86
TNRC18O15417 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.45■□□□□ 0.86
TNRC18O15417 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TNRC18O15417 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.45■□□□□ 0.86
TNRC18O15417 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNRC18O15417 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.44■□□□□ 0.86
TNRC18O15417 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.44■□□□□ 0.86
TNRC18O15417 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.44■□□□□ 0.86
TNRC18O15417 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.44■□□□□ 0.86
TNRC18O15417 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.44■□□□□ 0.86
TNRC18O15417 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TNRC18O15417 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.44■□□□□ 0.86
TNRC18O15417 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TNRC18O15417 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.44■□□□□ 0.86
TNRC18O15417 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TNRC18O15417 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.44■□□□□ 0.86
TNRC18O15417 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.44■□□□□ 0.86
TNRC18O15417 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.44■□□□□ 0.86
TNRC18O15417 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNRC18O15417 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNRC18O15417 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.43■□□□□ 0.86
TNRC18O15417 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNRC18O15417 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNRC18O15417 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TNRC18O15417 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.43■□□□□ 0.86
TNRC18O15417 AP000344.2-201ENST00000512987 629 ntBASIC20.43■□□□□ 0.86
TNRC18O15417 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNRC18O15417 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.43■□□□□ 0.86
TNRC18O15417 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNRC18O15417 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNRC18O15417 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms