Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.33■□□□□ 0.37
TO15178 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TO15178 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TO15178 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.33■□□□□ 0.37
TO15178 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TO15178 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TO15178 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TO15178 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TO15178 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.33■□□□□ 0.37
TO15178 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.33■□□□□ 0.36
TO15178 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TO15178 AC211429.1-201ENST00000415277 523 ntBASIC17.33■□□□□ 0.36
TO15178 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.33■□□□□ 0.36
TO15178 ECEL1P2-202ENST00000465689 757 ntBASIC17.33■□□□□ 0.36
TO15178 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.33■□□□□ 0.36
TO15178 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
TO15178 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TO15178 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.33■□□□□ 0.36
TO15178 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TO15178 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
TO15178 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TO15178 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
TO15178 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TO15178 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 AP000974.1-201ENST00000623909 2387 ntBASIC17.32■□□□□ 0.36
TO15178 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.32■□□□□ 0.36
TO15178 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.32■□□□□ 0.36
TO15178 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TO15178 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.32■□□□□ 0.36
TO15178 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.32■□□□□ 0.36
TO15178 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.32■□□□□ 0.36
TO15178 AL512604.3-201ENST00000569583 964 ntBASIC17.32■□□□□ 0.36
TO15178 WWOX-216ENST00000569818 525 ntBASIC17.32■□□□□ 0.36
TO15178 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.32■□□□□ 0.36
TO15178 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.32■□□□□ 0.36
TO15178 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
TO15178 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.32■□□□□ 0.36
TO15178 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.32■□□□□ 0.36
TO15178 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TO15178 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TO15178 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.31■□□□□ 0.36
TO15178 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TO15178 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.31■□□□□ 0.36
TO15178 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.31■□□□□ 0.36
TO15178 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.31■□□□□ 0.36
TO15178 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.31■□□□□ 0.36
TO15178 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.31■□□□□ 0.36
TO15178 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.31■□□□□ 0.36
TO15178 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TO15178 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.31■□□□□ 0.36
TO15178 MIR3180-5-201ENST00000583743 153 ntBASIC17.31■□□□□ 0.36
TO15178 LINC01023-201ENST00000606054 436 ntBASIC17.31■□□□□ 0.36
TO15178 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.31■□□□□ 0.36
TO15178 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TO15178 MTMR9LP-203ENST00000426597 1545 ntBASIC17.31■□□□□ 0.36
TO15178 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TO15178 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.3■□□□□ 0.36
TO15178 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 AC087289.5-201ENST00000586076 3175 ntBASIC17.3■□□□□ 0.36
TO15178 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.3■□□□□ 0.36
TO15178 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TO15178 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.3■□□□□ 0.36
TO15178 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TO15178 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TO15178 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms