Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CDC7O00311 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.49■□□□□ 0.55
CDC7O00311 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 MTMR9LP-203ENST00000426597 1545 ntBASIC18.49■□□□□ 0.55
CDC7O00311 AL135905.2-201ENST00000584934 1404 ntBASIC18.49■□□□□ 0.55
CDC7O00311 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDC7O00311 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CDC7O00311 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.48■□□□□ 0.55
CDC7O00311 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.48■□□□□ 0.55
CDC7O00311 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.48■□□□□ 0.55
CDC7O00311 KRT8P32-201ENST00000512863 1461 ntBASIC18.48■□□□□ 0.55
CDC7O00311 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CDC7O00311 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.48■□□□□ 0.55
CDC7O00311 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CDC7O00311 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CDC7O00311 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.48■□□□□ 0.55
CDC7O00311 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.48■□□□□ 0.55
CDC7O00311 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CDC7O00311 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.48■□□□□ 0.55
CDC7O00311 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.48■□□□□ 0.55
CDC7O00311 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDC7O00311 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.48■□□□□ 0.55
CDC7O00311 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDC7O00311 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 RPS2P55-201ENST00000397318 883 ntBASIC18.47■□□□□ 0.55
CDC7O00311 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.47■□□□□ 0.55
CDC7O00311 UBE2SP1-201ENST00000450587 669 ntBASIC18.47■□□□□ 0.55
CDC7O00311 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 AC107956.1-201ENST00000494359 873 ntBASIC18.47■□□□□ 0.55
CDC7O00311 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.47■□□□□ 0.55
CDC7O00311 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.47■□□□□ 0.55
CDC7O00311 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.47■□□□□ 0.55
CDC7O00311 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.47■□□□□ 0.55
CDC7O00311 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.47■□□□□ 0.55
CDC7O00311 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.47■□□□□ 0.55
CDC7O00311 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.47■□□□□ 0.55
CDC7O00311 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.47■□□□□ 0.55
CDC7O00311 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDC7O00311 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC7O00311 FSCN1P1-201ENST00000568912 1481 ntBASIC18.46■□□□□ 0.55
CDC7O00311 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.46■□□□□ 0.55
CDC7O00311 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC7O00311 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC7O00311 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CDC7O00311 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC7O00311 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.46■□□□□ 0.55
CDC7O00311 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.46■□□□□ 0.55
CDC7O00311 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDC7O00311 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.46■□□□□ 0.55
CDC7O00311 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.46■□□□□ 0.55
CDC7O00311 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
CDC7O00311 AL499627.1-201ENST00000569373 2188 ntBASIC18.46■□□□□ 0.55
CDC7O00311 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC7O00311 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDC7O00311 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC7O00311 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.46■□□□□ 0.55
CDC7O00311 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.46■□□□□ 0.55
CDC7O00311 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDC7O00311 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC7O00311 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDC7O00311 AC126763.1-201ENST00000552015 2118 ntBASIC18.46■□□□□ 0.55
CDC7O00311 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDC7O00311 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDC7O00311 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDC7O00311 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.45■□□□□ 0.54
CDC7O00311 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CDC7O00311 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.45■□□□□ 0.54
CDC7O00311 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDC7O00311 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.45■□□□□ 0.54
CDC7O00311 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CDC7O00311 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms