Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 C1QL1P1-201ENST00000568105 661 ntBASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 HEIH-201ENST00000623091 1652 ntBASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM49D1C9J1S8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM49D1C9J1S8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 UNC93B4-201ENST00000505679 747 ntBASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 AL499627.1-201ENST00000569373 2188 ntBASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM49D1C9J1S8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms