Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 FZD10-202ENST00000539839 3282 ntBASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DUXBA0A1W2PPF3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 HTR7P1-202ENST00000624664 4411 ntBASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 ZNRF2P3-201ENST00000424200 374 ntBASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
DUXBA0A1W2PPF3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 TSPY23P-201ENST00000440136 739 ntBASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DUXBA0A1W2PPF3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms