Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV1D-43A0A0B4J1Z2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
IGKV1D-43A0A0B4J1Z2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
IGKV1D-43A0A0B4J1Z2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
IGKV1D-43A0A0B4J1Z2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AL355355.2-201ENST00000442321 338 ntBASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC097488.1-201ENST00000507834 756 ntBASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AP003071.4-201ENST00000562276 1284 ntBASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 DGCR10-201ENST00000609839 495 ntBASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC126763.1-201ENST00000552015 2118 ntBASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 RCC2P3-201ENST00000418112 1537 ntBASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 AC090164.3-201ENST00000610780 2143 ntBASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.62■□□□□ 0.25
IGKV1D-43A0A0B4J1Z2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms