Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AP001271.2-201ENST00000624018 1556 ntBASIC13.37□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ESRRAP1-201ENST00000400596 1257 ntBASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RPS2P52-201ENST00000469610 820 ntBASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 WIZP1-201ENST00000531444 2299 ntBASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PHGDH-210ENST00000641115 1638 ntBASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV8-3A0A0A6YYJ7 AC090164.3-201ENST00000610780 2143 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms