Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CYP46A1Q9Y6A2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 AC142381.4-202ENST00000563973 229 ntBASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 MIR6786-201ENST00000616843 113 ntBASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 AL135905.2-201ENST00000584934 1404 ntBASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CYP46A1Q9Y6A2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 FAM197Y1-201ENST00000421178 764 ntBASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 FAM207BP-201ENST00000447172 505 ntBASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 B3GAT3P1-201ENST00000471720 806 ntBASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 CKBP1-201ENST00000565489 1086 ntBASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 AC068587.9-201ENST00000641814 219 ntBASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CYP46A1Q9Y6A2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 KRT8P32-201ENST00000512863 1461 ntBASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 AC098590.1-201ENST00000468126 897 ntBASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.35■■□□□ 1.17
CYP46A1Q9Y6A2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CYP46A1Q9Y6A2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms