Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 SIRPAP1-201ENST00000448467 1770 ntBASIC17.83■□□□□ 0.44
AP4S1Q9Y587 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4S1Q9Y587 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 AL589743.5-201ENST00000616611 1050 ntBASIC17.82■□□□□ 0.44
AP4S1Q9Y587 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
AP4S1Q9Y587 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 KRT18P61-201ENST00000585825 1298 ntBASIC17.81■□□□□ 0.44
AP4S1Q9Y587 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.81■□□□□ 0.44
AP4S1Q9Y587 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 KRT8P8-201ENST00000434750 1448 ntBASIC17.81■□□□□ 0.44
AP4S1Q9Y587 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.81■□□□□ 0.44
AP4S1Q9Y587 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 AC106820.2-201ENST00000563775 3264 ntBASIC17.8■□□□□ 0.44
AP4S1Q9Y587 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4S1Q9Y587 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms