Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 AC004951.3-201ENST00000418645 1148 ntBASIC18.73■□□□□ 0.59
TSR3Q9UJK0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 AC008040.2-201ENST00000461049 708 ntBASIC18.73■□□□□ 0.59
TSR3Q9UJK0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 AL049637.2-201ENST00000641778 930 ntBASIC18.73■□□□□ 0.59
TSR3Q9UJK0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 KRT8P11-201ENST00000409686 1436 ntBASIC18.73■□□□□ 0.59
TSR3Q9UJK0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 PKD1P1-201ENST00000458669 6805 ntBASIC18.73■□□□□ 0.59
TSR3Q9UJK0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSR3Q9UJK0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.72■□□□□ 0.59
TSR3Q9UJK0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 AL135905.2-201ENST00000584934 1404 ntBASIC18.72■□□□□ 0.59
TSR3Q9UJK0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TSR3Q9UJK0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 MIR6786-201ENST00000616843 113 ntBASIC18.71■□□□□ 0.59
TSR3Q9UJK0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.71■□□□□ 0.59
TSR3Q9UJK0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TSR3Q9UJK0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TSR3Q9UJK0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSR3Q9UJK0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TSR3Q9UJK0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TSR3Q9UJK0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms