Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 AFG3L1P-217ENST00000557444 2447 ntBASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 AC104417.2-201ENST00000562989 1793 ntBASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 AL355355.2-201ENST00000442321 338 ntBASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 AC008550.1-201ENST00000511500 884 ntBASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 AL049637.2-201ENST00000641778 930 ntBASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00474Q9P2X8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 AC004951.3-201ENST00000418645 1148 ntBASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 PRSS44-201ENST00000515154 1146 ntBASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 DGCR10-201ENST00000609839 495 ntBASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 AC020916.1-201ENST00000587762 1774 ntBASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00474Q9P2X8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC00474Q9P2X8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms