Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 AC020763.4-201ENST00000623414 4170 ntBASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 ZNF815P-204ENST00000434898 1737 ntBASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 TSPY14P-201ENST00000303979 915 ntBASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 AC004980.1-204ENST00000429707 299 ntBASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 MESTP1-201ENST00000404287 994 ntBASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 ATP5G1P1-201ENST00000448724 379 ntBASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 AC097488.1-201ENST00000507834 756 ntBASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 CROCCP3-202ENST00000420820 1947 ntBASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCKIPSDQ9NZQ3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 AC073508.3-201ENST00000619697 1419 ntBASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NCKIPSDQ9NZQ3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 AL049812.1-201ENST00000432563 2267 ntBASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NCKIPSDQ9NZQ3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms