Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 AC091390.4-202ENST00000476426 537 ntBASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 AC011298.2-201ENST00000617989 482 ntBASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 AC130371.2-201ENST00000619443 611 ntBASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 KRT8P41-201ENST00000533985 1514 ntBASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.07■□□□□ 0.48
NECTIN3Q9NQS3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NECTIN3Q9NQS3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 UNC93B2-201ENST00000285383 730 ntBASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NECTIN3Q9NQS3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms