Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.38■□□□□ 0.21
C12orf4Q9NQ89 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
C12orf4Q9NQ89 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 GPX1P1-201ENST00000388829 606 ntBASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C12orf4Q9NQ89 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 NOC2LP2-201ENST00000407594 1944 ntBASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms