Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.15■□□□□ 0.34
SH2D2AQ9NP31 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SH2D2AQ9NP31 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SH2D2AQ9NP31 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SH2D2AQ9NP31 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SH2D2AQ9NP31 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 SLC25A24-204ENST00000569674 2357 ntBASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 HOMER2P1-201ENST00000455653 964 ntBASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D2AQ9NP31 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 MIR564-202ENST00000385049 94 ntBASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 LINC01238-205ENST00000567549 1107 ntBASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
SH2D2AQ9NP31 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 AL049812.1-201ENST00000432563 2267 ntBASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.12■□□□□ 0.33
SH2D2AQ9NP31 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms