Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSNK1G1Q9HCP0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 HOMER2P1-201ENST00000455653 964 ntBASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSNK1G1Q9HCP0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 LINC01238-205ENST00000567549 1107 ntBASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 AC112497.1-201ENST00000624824 639 ntBASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 MYC-208ENST00000641036 567 ntBASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 AL357033.4-201ENST00000617703 1807 ntBASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 AC034236.2-201ENST00000606662 1610 ntBASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSNK1G1Q9HCP0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 AC006333.2-201ENST00000607957 2099 ntBASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.68■□□□□ 0.74
CSNK1G1Q9HCP0 SEC1P-202ENST00000473944 940 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms