Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC063926.2-201ENST00000623766 1308 ntBASIC17.53■□□□□ 0.4
CHD8Q9HCK8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 GK-202ENST00000378941 458 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 UNC93B6-202ENST00000528242 690 ntBASIC17.53■□□□□ 0.4
CHD8Q9HCK8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.52■□□□□ 0.4
CHD8Q9HCK8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHD8Q9HCK8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 AL162377.1-201ENST00000618844 1793 ntBASIC17.52■□□□□ 0.39
CHD8Q9HCK8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD8Q9HCK8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 RN7SL606P-201ENST00000472779 293 ntBASIC17.51■□□□□ 0.39
CHD8Q9HCK8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 GUSBP12-201ENST00000513727 720 ntBASIC17.51■□□□□ 0.39
CHD8Q9HCK8 AC005829.1-201ENST00000570002 483 ntBASIC17.51■□□□□ 0.39
CHD8Q9HCK8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 AJ011932.1-201ENST00000621707 465 ntBASIC17.51■□□□□ 0.39
CHD8Q9HCK8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD8Q9HCK8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 AC015922.1-201ENST00000421102 1152 ntBASIC17.5■□□□□ 0.39
CHD8Q9HCK8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 MIR3180-5-201ENST00000583743 153 ntBASIC17.5■□□□□ 0.39
CHD8Q9HCK8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD8Q9HCK8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms