Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 RPS2P55-201ENST00000397318 883 ntBASIC18.88■□□□□ 0.61
MRM3Q9HC36 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 AC107956.1-201ENST00000494359 873 ntBASIC18.88■□□□□ 0.61
MRM3Q9HC36 NUDT16P1-203ENST00000513809 620 ntBASIC18.88■□□□□ 0.61
MRM3Q9HC36 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
MRM3Q9HC36 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRM3Q9HC36 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 AC008550.1-201ENST00000511500 884 ntBASIC18.87■□□□□ 0.61
MRM3Q9HC36 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 AP001412.1-201ENST00000608405 714 ntBASIC18.87■□□□□ 0.61
MRM3Q9HC36 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.87■□□□□ 0.61
MRM3Q9HC36 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRM3Q9HC36 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 AC233702.5-201ENST00000584107 538 ntBASIC18.86■□□□□ 0.61
MRM3Q9HC36 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.86■□□□□ 0.61
MRM3Q9HC36 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRM3Q9HC36 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 AC113410.3-201ENST00000623366 203 ntBASIC18.85■□□□□ 0.61
MRM3Q9HC36 MYC-208ENST00000641036 567 ntBASIC18.85■□□□□ 0.61
MRM3Q9HC36 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MRM3Q9HC36 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRM3Q9HC36 RCC2P3-201ENST00000418112 1537 ntBASIC18.84■□□□□ 0.61
MRM3Q9HC36 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRM3Q9HC36 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRM3Q9HC36 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.84■□□□□ 0.61
MRM3Q9HC36 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRM3Q9HC36 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRM3Q9HC36 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms