Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 AC024563.2-201ENST00000603282 481 ntBASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf49Q9H6J7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 AL109659.2-201ENST00000606809 1674 ntBASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 PMS2P2-201ENST00000425039 1128 ntBASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 AC022898.2-201ENST00000616822 1312 ntBASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf49Q9H6J7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf49Q9H6J7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 AL353692.3-201ENST00000407031 1396 ntBASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 BNIP3P18-201ENST00000593976 575 ntBASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 AC140113.2-201ENST00000604370 208 ntBASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 FAM215A-202ENST00000632077 792 ntBASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 AC020907.5-201ENST00000624372 1936 ntBASIC20.65■□□□□ 0.9
C11orf49Q9H6J7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C11orf49Q9H6J7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.64■□□□□ 0.9
C11orf49Q9H6J7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
C11orf49Q9H6J7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
C11orf49Q9H6J7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C11orf49Q9H6J7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms