Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.01■□□□□ 0.47
PIF1Q9H611 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PIF1Q9H611 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 AL138781.1-201ENST00000566567 1274 ntBASIC18.01■□□□□ 0.47
PIF1Q9H611 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.01■□□□□ 0.47
PIF1Q9H611 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.01■□□□□ 0.47
PIF1Q9H611 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PIF1Q9H611 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.01■□□□□ 0.47
PIF1Q9H611 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PIF1Q9H611 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18■□□□□ 0.47
PIF1Q9H611 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18■□□□□ 0.47
PIF1Q9H611 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18■□□□□ 0.47
PIF1Q9H611 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18■□□□□ 0.47
PIF1Q9H611 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PIF1Q9H611 PPP1R14BP2-201ENST00000426284 444 ntBASIC18■□□□□ 0.47
PIF1Q9H611 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18■□□□□ 0.47
PIF1Q9H611 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18■□□□□ 0.47
PIF1Q9H611 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18■□□□□ 0.47
PIF1Q9H611 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PIF1Q9H611 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PIF1Q9H611 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18■□□□□ 0.47
PIF1Q9H611 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PIF1Q9H611 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.99■□□□□ 0.47
PIF1Q9H611 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PIF1Q9H611 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.99■□□□□ 0.47
PIF1Q9H611 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.99■□□□□ 0.47
PIF1Q9H611 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PIF1Q9H611 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.99■□□□□ 0.47
PIF1Q9H611 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.99■□□□□ 0.47
PIF1Q9H611 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
PIF1Q9H611 AC091874.3-201ENST00000512672 1195 ntBASIC17.99■□□□□ 0.47
PIF1Q9H611 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.99■□□□□ 0.47
PIF1Q9H611 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.99■□□□□ 0.47
PIF1Q9H611 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.99■□□□□ 0.47
PIF1Q9H611 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.99■□□□□ 0.47
PIF1Q9H611 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
PIF1Q9H611 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 AC126763.1-201ENST00000552015 2118 ntBASIC17.99■□□□□ 0.47
PIF1Q9H611 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PIF1Q9H611 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PIF1Q9H611 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PIF1Q9H611 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms