Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 RASA4DP-201ENST00000460726 1199 ntBASIC20.36■□□□□ 0.85
NXF3Q9H4D5 SEC1P-202ENST00000473944 940 ntBASIC20.36■□□□□ 0.85
NXF3Q9H4D5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 LINC01311-201ENST00000565162 1445 ntBASIC20.36■□□□□ 0.85
NXF3Q9H4D5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.35■□□□□ 0.85
NXF3Q9H4D5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NXF3Q9H4D5 IER3-202ENST00000376377 1350 ntBASIC20.34■□□□□ 0.85
NXF3Q9H4D5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 SPDYE13P-201ENST00000445314 798 ntBASIC20.34■□□□□ 0.85
NXF3Q9H4D5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 AC092597.1-201ENST00000487352 616 ntBASIC20.34■□□□□ 0.85
NXF3Q9H4D5 VENTXP5-201ENST00000523979 775 ntBASIC20.34■□□□□ 0.85
NXF3Q9H4D5 ZNF444P1-201ENST00000559497 298 ntBASIC20.34■□□□□ 0.85
NXF3Q9H4D5 AC112497.1-201ENST00000624824 639 ntBASIC20.34■□□□□ 0.85
NXF3Q9H4D5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.34■□□□□ 0.85
NXF3Q9H4D5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 AC034232.1-201ENST00000506026 1064 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 277.7 ms