Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 CA15P1-201ENST00000481698 905 ntBASIC23.78■■□□□ 1.4
CHMP4BQ9H444 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 MYC-208ENST00000641036 567 ntBASIC23.78■■□□□ 1.4
CHMP4BQ9H444 AP006294.2-201ENST00000641667 209 ntBASIC23.78■■□□□ 1.4
CHMP4BQ9H444 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 ANO7L1-203ENST00000602586 1720 ntBASIC23.78■■□□□ 1.4
CHMP4BQ9H444 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP4BQ9H444 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 BCL2-203ENST00000589955 5011 ntBASIC23.77■■□□□ 1.4
CHMP4BQ9H444 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP4BQ9H444 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP4BQ9H444 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 SLC25A1P4-201ENST00000567977 778 ntBASIC23.75■■□□□ 1.39
CHMP4BQ9H444 AC026471.5-201ENST00000615068 467 ntBASIC23.75■■□□□ 1.39
CHMP4BQ9H444 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP4BQ9H444 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CHMP4BQ9H444 MFAP1P1-201ENST00000442257 1255 ntBASIC23.74■■□□□ 1.39
CHMP4BQ9H444 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms