Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 KSR1P1-201ENST00000446298 240 ntBASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 AF186192.3-201ENST00000583427 947 ntBASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF4Q9BSR8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 KRT16P1-201ENST00000399124 1418 ntBASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 SNORA78-201ENST00000459373 127 ntBASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 AL353708.3-201ENST00000610272 989 ntBASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF4Q9BSR8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF4Q9BSR8 KRT8P11-201ENST00000409686 1436 ntBASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 AC104581.1-202ENST00000635932 2618 ntBASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 RCC2P6-201ENST00000526625 1557 ntBASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YIPF4Q9BSR8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms